Recovery Based on GSTR-1 vs 3B Mismatch Remanded; Invoice Cancellation Claim Must be Proven

By | November 26, 2025

Recovery Based on GSTR-1 vs 3B Mismatch Remanded; Invoice Cancellation Claim Must be Proven


Issue

Whether the department can initiate recovery proceedings under Section 79 (via Form GST DRC-01D) for a liability declared in GSTR-1 but not paid in GSTR-3B, when the taxpayer claims the underlying contract did not fructify and invoices were cancelled post-facto, but failed to substantiate this claim in their reply to the intimation (Form GST DRC-01B).


Facts

  • The Transaction: The petitioner raised invoices on a recipient and reported them in GSTR-1, creating a tax liability on the portal.

  • The Cancellation: The petitioner claimed that the contract ultimately did not fructify, and no services were actually provided. Consequently, they did not report the liability or pay the tax in GSTR-3B.

  • The Mismatch: The system flagged the discrepancy between GSTR-1 (Liability) and GSTR-3B (Nil/Lower Payment). The department issued an intimation in Form GST DRC-01B under Rule 88C.

  • The Reply: The petitioner filed a reply in Part-B of Form GST DRC-01B, simply asserting that the invoices had been cancelled post-facto.

  • The Action: Finding the reply unsatisfactory/incomplete, the department initiated recovery proceedings under Section 79 by issuing Form GST DRC-01D.

  • Petitioner’s Plea: The petitioner challenged the recovery, arguing that no tax is payable since no supply took place.


Decision

  • The Madras High Court disposed of the writ petition by remanding the matter to the department for a fresh decision.

  • Reply Was Incomplete: The Court held that the petitioner’s reply in Part-B was “incomplete.” Merely stating that invoices were cancelled is not sufficient to rebut the statutory liability created by GSTR-1.

  • Supply vs. Payment: The Court reiterated that under GST, if a service is provided, tax is payable regardless of whether the supplier has received payment from the recipient. The petitioner needs to prove that no service was provided at all.

  • Evidence Required: To substantiate the claim of “no supply,” the petitioner must produce their Annual Books of Account showing that the transaction was not recorded as revenue/receivable. Unilateral cancellation of invoices without corroborating books is ineffectual.

  • Opportunity: In the interest of justice, the Court granted the petitioner 30 days to file a detailed reply with proper evidence (books, contract correspondence). The Officer was directed to pass a fresh order thereafter.


Key Takeaways

  • GSTR-1 is a Self-Admission: Data filed in GSTR-1 is treated as a self-admission of liability. To negate it, the taxpayer must provide strong, documentary evidence (like cancelled contracts, correspondence, or audited books) proving the supply never took place.

  • Rule 88C Compliance: A “one-line” reply to a DRC-01B intimation is risky. Taxpayers must attach supporting documents to explain why the GSTR-1 liability should not be recovered.

  • Credit Note Route: The proper mechanism to nullify a GSTR-1 invoice is usually issuing a Credit Note in a subsequent period. Simply ignoring it in GSTR-3B triggers automated recovery actions.

HIGH COURT OF MADRAS
Sudhan VFX
v.
Superintendent
C.Saravanan, J.
W.P. No. 41761 of 2025
W.M.P. Nos. 46807 & 46812 of 2025
NOVEMBER  3, 2025
K.M. Malarmannan for the Petitioner. Sai Srujan Tayi, Senior Standing Counsel for the Respondent.
ORDER
1. Mr. Sai Srujan Tayi, learned Senior Standing Counsel takes notice for the Respondent.
2. This Writ Petition is being disposed of at the time of admission with the consent of the learned counsel for the Petitioner and the learned Senior Standing Counsel for the Respondent.
3. The Petitioner claims that the Petitioner had raised invoices on the recipient. However, the recipient failed to honour the contract and therefore the contract did not fructify and the Petitioner was not liable to pay tax as no service was provided.
4. It is admitted that the Petitioner had recorded the transaction in Form GSTR-1 for the month of July 2023. However, it is submitted that in the monthly return in Form GSTR-3B, same was not reflected as there was no concluded contract with the supplier and therefore the Petitioner was not liable to pay tax.
5. It is submitted that the Respondent had issued Form GST DRC-01B intimation on 29.09.2023 under Rule 88C of the respective GST Rules which was also replied by the Petitioner on the same date in Part-B. However, without taking note of the same, the impugned recovery proceeding in Form GST DRC-01D has been issued under Section 79 of the respective GST enactments, demanding total tax of Rs.39,60,000/- towards IGST for the Tax Period between 4th July, 2023 and 5th July, 2023.
6. Learned Senior Standing Counsel for the Respondent submits that the tax liability has accrued as the Petitioner had supplied services, and had been recorded the same in Form GSTR-1 and in Form GSTR-3B. Hence, it is submitted that the Department is entitled to invoke machinery under Section 79(1) of the respective GST enactments.
7. A reading of the reply in Part-B to Form GST DRC-01B dated 29.09.2023 seems to indicate that the Petitioner has cancelled the invoice post facto.
8. The reply of the Petitioner in Part-B to Form GST DRC-01B is reproduced below:-
“The three invoices have been cancelled and payment has not been received from the vendor side. Therefore we have deduct that amount and file the GST Return.”
9. The reply is incomplete and therefore the impugned recovery proceeding has been initiated to recover the aforesaid sum from the Petitioner.
10. In case the Petitioner has indeed provide service but not received payment, the Petitioner will be still liable to pay tax in terms of the provisions of the respective GST enactments.
11. The Petitioner ought to have given a proper reply by substantiating the same with the Annual Books of Account. If the amounts are shown in the Annual Books of Account are receivable, mere cancellation of the invoices unilaterally at a later point of time is of no avail.
12. Considering the overall facts of the case, this Writ Petition is disposed of by remitting the case back to the Respondent to pass a fresh order within a period of thirty days from the date of receipt of a copy of this order.
13. Within such time, the Petitioner shall give a proper reply with proper evidentiary materials to substantiate the case.
14. In case the Petitioner fails to file such a reply within such time, the present Writ Petition will be deemed to have been dismissed in limine by this order.
15. This Writ Petition stands disposed of with the above observations.
No costs. Connected Writ Miscellaneous Petitions are closed.
Category: GST

About CA Satbir Singh

Chartered Accountant having 12+ years of Experience in Taxation , Finance and GST related matters and can be reached at Email : Taxheal@gmail.com