Amount paid during investigation is adjustable towards pre-deposit for filing GST appeal.

By | June 28, 2025

Amount paid during investigation is adjustable towards the mandatory pre-deposit for filing an appeal.

Issue

  1. Whether an amount of tax/ITC that has been duplicated in two separate show-cause notices and confirmed in corresponding orders can be considered a valid basis for demanding a separate pre-deposit for each appeal?
  2. Can an amount voluntarily deposited by an assessee during the investigation stage be adjusted against the mandatory 10% pre-deposit required for filing a statutory appeal under Section 107 of the CGST Act?

Facts

The assessee was issued two separate show-cause notices, which culminated in two orders-in-original. The first order proposed a demand and recovery of Input Tax Credit (ITC) amounting to ₹2.83 crore. The second order proposed a similar demand for ₹60.73 lakh.

The assessee contended that the demand of ₹60.73 lakh, attributed to ITC availed from a supplier named Fortune Graphics, was erroneously included in both show-cause notices and, consequently, in both final orders. This led to a duplication of the demand.

Furthermore, during the course of the investigation, the assessee had already deposited a sum of ₹1.16 crore with the department. The assessee argued that this amount should be allowed to be adjusted against the statutory pre-deposit required to file appeals against the orders, as mandated by Section 107 of the CGST Act. The assessee sought permission from the High Court to file the appeals by making the necessary adjustments.

Decision

The High Court ruled in favour of the assessee on both counts, providing significant relief and clarifying the position on pre-deposit adjustments.

  1. On Duplication of Demand: The Court examined the records and found merit in the assessee’s submission that the demand of ₹60.73 lakh was indeed duplicated in both orders-in-original. In view of this clear duplication, the Court directed that the assessee could file appeals against both orders, but the pre-deposit would be calculated only on the non-duplicated amount. Specifically, the assessee was required to pay the pre-deposit only for the appeal challenging the first order (related to the ₹2.83 crore demand), and no separate pre-deposit was required for the appeal against the second order, which contained the duplicated demand.
  2. On Adjustment of Amount Paid: The Court explicitly held that the amount of ₹1.16 crore, which was deposited by the assessee during the investigation, could be adjusted towards the pre-deposit requirement for filing the appeal.

This decision allowed the assessee to proceed with the appeals without being burdened by a duplicated pre-deposit amount and by utilizing the sum already paid to the department.

Key Takeaways

  • Amount Paid During Investigation is Adjustable: An amount paid by a taxpayer during an investigation, audit, or inquiry is not a final payment of tax but a deposit. The courts have consistently held that such amounts are available to the assessee and can be adjusted against the mandatory pre-deposit required under Section 107 of the CGST Act for filing an appeal.
  • No Pre-deposit on Duplicated Demands: Tax authorities cannot demand a pre-deposit on a demand amount that has been erroneously duplicated across multiple orders. The right to appeal should not be hindered by such procedural errors. The pre-deposit is to be calculated on the actual, distinct disputed tax amount.
  • Facilitating the Right to Appeal: The requirement of a pre-deposit is a condition for hearing an appeal, not a means to deny the statutory right of appeal. Courts will intervene under writ jurisdiction to rectify patent errors, such as duplicated demands, that place an unjust financial burden on the appellant.
  • DRC-03 Payments: Payments made “voluntarily” via Form GST DRC-03 during an investigation are considered deposits and do not constitute an admission of liability. These amounts must be accounted for and can be used to fulfill pre-deposit conditions for future appeals arising from the same proceedings.
HIGH COURT OF DELHI
Rajesh Tanwar
v.
Commissioner, CGST, Delhi West
PRATHIBA M. SINGH and Rajneesh Kumar Gupta, JJ.
W.P.(C) No.7220 OF 2025
MAY  26, 2025
Anunay MishraBharat Bhushan and Ms. Nidhi Gupta, Advs. for the Petitioner. Pranay Mohan Govil, Sr. Standing Counsel for the Respondent.
ORDER
1. This hearing has been done through hybrid mode.
CM APPL.32589/2025 (for exemption)
2. Allowed, subject to all just exceptions. Application is disposed of.
W.P.(C) 7220/2025 & CM APPL.32588/2025 (for interim relief)
3. The present petition has been filed by the Petitioner- Rajesh Tanwar under Article 226 of the Constitution of India, inter alia, assailing the two Orders-in-Original bearing reference nos. 69/CGST WEST/GST/SKG/SDC/2024-25 dated 01st February, 2025 and 318/CGST WEST/GST/SKG/SDC/2024-25 dated 04th February, 2025 respectively (hereinafter ‘impugned orders’).
4. Itisthe case of the Petitioner that two Show Cause Notices were issued, by Directorate General for GST Intelligence (hereinafter ‘DGGI’) on 31st July, 2024 proposing the demand and recovery of ITC of the following amounts.
Rs.2,83,56,714/-
Rs.60,73,541/-
5. Replies were filed by the Petitioner. One of the grounds raised in the replies was that the amount of Rs.60,73,541/-, which was shown as being availed from M/s Fortune Graphics Limited, was duplicated in both the notices. Second submission is that an amount of Rs.1,16,47,808/- has been deposited by the Petitioner during investigation with the Respondent – GST Department. Ld. Counsel for the Petitioner thus seeks the following reliefs.
(i)That the pre-deposit should not be directed qua the duplicated amount of Rs.60,73,541/-.
(ii)Secondly, the amount which has been paid by the Petitioner during the investigation, ought to be permitted to be adjusted for the purpose of pre-deposit while filing the appeal under Section 107 of the Central Goods and Services Act (hereinafter ‘CGST Act’).
6. The Court has examined the matter and it is prima facie seen that the amount of Rs. Rs.60,73,541/- is duplicated as captured in the impugned Order-in-Original, which is extracted below:
“24.7 M/s. Riva Exports:
The noticee has contended that there is duplication of demand and multiple SCNs have been issued in the matter to the notice. In this regard I find that the taxpayer can approach the appropriate forum after discharging the entire liability for appropriation of liability in case the liabilities against noticee are confirmed.
Rest of the contention of the noticee are identical to that made by by Sh. Pawan Tanwar and M/s. Ganpati Exports Pvt. Ltd. which I have already discussed in details in preceding paras and found that they have no merit. Therefore, I find that all the allegations levelled in the SCN against the noticees to be true and accordingly they are liable for payment of tax/interest/penalty as outlined in the impugned SCN andI hold accordingly.
Further, as requested by the above mentioned noticee for cross examination and inspection of investigation file, I find that it is discretion of adjudicating authority andasIhave to decide the cases within a particular time frame, I deny the same due to paucity of time.
As for as examination of defence witnesses, I find that the opportunity has already be en provided to the noticees by way of giving opportunity for personal hearing in the matter.”
7. In view of the above, the following directions are issued.
(i)The Petitioner would be permitted to prefer appeals challenging both the orders dated 1st February, 2025 and 4th February, 2025 and a pre-deposit qua the demand of Rs.2,83,56,714/- shall be paid in filing the appeal challenging the impugned order 1st February, 2025. In the second appeal, no pre-deposit shall be paid on the grounds of duplication.
(ii)For the purpose of pre-deposit, the amount that is lying with the GST Department, which was deposited by the Petitioner during the course of investigation, can be adjusted in respect of the predeposit.
(iii)In view of the above, the Petitioner may file both the appeals by 15th July, 2025 seeking adjustment as directed above. The appeals, if filed by 15th July, 2025 in terms of this order, shall not be dismissed as being barred by limitation. If online filing is proving difficult due to adjustment, which the Court has granted today, the Petitioner is permitted to file the appeal physically.
8. The present petition, along with pending application, is disposed of in the above terms.